Download a PCAGenomicSignatures model

Download a PCAGenomicSignatures model

getModel(prior = c("C2", "PLIERpriors"), version = "latest", load = TRUE)

Arguments

prior

The name of gene sets used to annotate PCAGenomicSignatures. Currently there are two available options.

• C2 : MSigDB C2 (curated gene sets)

• PLIERpriors : bloodCellMarkersIRISDMAP, svmMarkers, and canonicalPathways

version

Default is latest. Available versions are listed in version column of availableRAVmodel() output.

load

Default is TRUE. If it's set to FALSE, the models are just downloaded to cache but not loaded into memory.

Value

File cache location or PCAGenomicSignatures object loaded from it.

Examples

z = getModel("C2")
#> [1] "downloading"